PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.A6V6U
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB_related
Protein Properties Length: 486aa    MW: 54371.1 Da    PI: 9.1164
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.A6V6UgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.91.2e-08437484347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 
                      +W+  E+e l  +v+++G g+WktI +      ++R   ++k++w++ 
      Aradu.A6V6U 437 KWSSLEEETLRTGVQMFGAGNWKTIRSFYSdvfEHRLSVDLKDKWRNM 484
                      8*********************************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.369430486IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.3E-11430486IPR009057Homeodomain-like
SuperFamilySSF466891.72E-13433485IPR009057Homeodomain-like
SMARTSM007170.0083434486IPR001005SANT/Myb domain
PfamPF002496.8E-6437484IPR001005SANT/Myb domain
CDDcd116605.16E-16438486No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 486 aa     Download sequence    Send to blast
SSAPDSLVSK ILKVLNLSGA DPNLKKTLLL RTLRSQLCNA SITETALEIL EQIEAIDRND  60
AVPIIDSMRR AYCAVAVECT VKYLAASYDG TTSGKYLSAV TRIWRGRVEE LEQGQSELFF  120
DETARWRDDI EAALFDTRVS DRLKELNTRN DAFTEVRFYL QEVWETMGPS FLESVAEMTK  180
NKGKTKGKGK GLPNVILNPA PVTIVPGYTT GVCRNASGAE QARDHGVDDN GDGGNDGSRC  240
MDGVEVKRAE GSVDGTQEHA KKKKARGNPQ LKRKPPAFRR CSRGVKMSSA EELGTERSWR  300
KNDTVLSGEV KTARESLKSS SSELRALVND PLLEALDIPD AVRSKLARKG TNHEQPMENH  360
SGDVDVRNSN TCSTISPYQP NDAEHKKSPS VEPNKTAHKR PNLMEPSGTS QTYEWNDSIE  420
NMPNGMQPRR KKRKNRKWSS LEEETLRTGV QMFGAGNWKT IRSFYSDVFE HRLSVDLKDK  480
WRNMMR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1428436RRKKRKNRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015949044.10.0PREDICTED: uncharacterized protein LOC107473962
TrEMBLV7BLL51e-127V7BLL5_PHAVU; Uncharacterized protein
STRINGGLYMA18G05900.21e-122(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF28243260
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58340.27e-16MYB_related family protein